Document Type
Article
Publication Date
2015
Keywords
ribosomal-rna; nodule bacteria; microbial genomes; root-nodule; system;genus; database; legumes; island; nov
Abstract
Bradyrhizobium sp. Ai1a-2 is is an aerobic, motile, Gram-negative, non-spore-forming rod that was isolated from an effective nitrogen fixing root nodule of Andira inermis collected from Tres Piedras in Costa Rica. In this report we describe, for the first time, the genome sequence information and annotation of this legume microsymbiont. The 9,029,266 bp genome has a GC content of 62.56% with 247 contigs arranged into 246 scaffolds. The assembled genome contains 8,482 protein-coding genes and 102 RNA-only encoding genes. This rhizobial genome was sequenced as part of the DOE Joint Genome Institute 2010 Genomic Encyclopedia for Bacteria and Archaea-Root Nodule Bacteria (GEBA-RNB) project proposal.
Publisher Attribution
Tian, R., Parker, M., Seshadri, R., Reddy, T. B. K., Markowitz, V., Ivanova, N., ... & Kyrpides, N. (2015). High-quality permanent draft genome sequence of Bradyrhizobium sp. Ai1a-2; a microsymbiont of Andira inermis discovered in Costa Rica. Standards in genomic sciences, 10(1), 1.
Recommended Citation
Tian, Rui; Parker, Matthew; Seshadri, Rekha; Reddy, T. B.K.; Markowitz, Victor; Ivanova, Natalia; Pati, Amrita; Woyke, Tanja; Baeshen, Mohammed; Baeshen, Nabih; Kyrpides, Nikos; and Reeve, Wayne, "High-quality permanent draft genome sequence of Bradyrhizobium sp Ai1a-2; a microsymbiont of Andira inermis discovered in Costa Rica" (2015). Biological Sciences Faculty Scholarship. 8.
https://orb.binghamton.edu/bio_fac/8